EnhancerDB
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  3. rs117854333[chr1:230220920]
Enhancers that have rs117854333[chr1:230220920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117854333[chr1:230220920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230220260 230221087 ZNF274 GTRD no Bone Marrow (K562) 107878375
chr1 230220260 230221087 ZNF274 GTRD no Bone Marrow (K562) 107878376
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 21391248
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 107878390
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 107878391
chr1 230220471 230220932 ZNF274 GTRD no Liver (HepG2) 21391268
chr1 230220471 230220932 ZNF274 GTRD no Liver (HepG2) 107878461
chr1 230220554 230221476 ZNF274 GTRD no Blood (GM12878) 107878465
Genes associated with rs117854333[chr1:230220920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More