EnhancerDB
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  3. rs117881127[chr2:39754412]
Enhancers that have rs117881127[chr2:39754412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39748525 39763075 enh18469
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs117881127[chr2:39754412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39754401 39754422 IRF1 JASPAR yes 73212657
chr2 39754403 39754418 PRDM1 JASPAR yes 73212658
chr2 39754404 39754418 STAT1 JASPAR yes 73212659
chr2 39754405 39754417 IRF1 JASPAR yes 73212660
chr2 39754407 39754428 IRF1 JASPAR yes 73212661
chr2 39754410 39754424 SPI1 JASPAR yes 73212662
chr2 39754410 39754431 IRF1 JASPAR yes 73212663
chr2 39754411 39754432 IRF1 JASPAR yes 73212664
chr2 39754412 39754433 IRF1 JASPAR yes 73212665
Genes associated with rs117881127[chr2:39754412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More