EnhancerDB
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Enhancers that have rs117960826[chr1:115709414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs117960826[chr1:115709414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115709139 115709515 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21330706
chr1 115709396 115709416 ESR1 JASPAR yes 31713233
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21330707
chr1 115709397 115709733 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107823457
chr1 115709399 115709417 ESR1 JASPAR yes 31713238
chr1 115709399 115709417 ESR2 JASPAR yes 31713239
chr1 115709399 115709419 PPARG JASPAR yes 31713240
chr1 115709401 115709416 ESR2 JASPAR yes 31713242
chr1 115709412 115709422 ESX1 JASPAR yes 31713244
chr1 115709412 115709422 GBX1 JASPAR yes 31713245
chr1 115709412 115709422 GBX2 JASPAR yes 31713246
chr1 115709412 115709422 GSX1 JASPAR yes 31713247
chr1 115709412 115709422 GSX2 JASPAR yes 31713248
chr1 115709412 115709422 HESX1 JASPAR yes 31713249
chr1 115709412 115709422 LBX2 JASPAR yes 31713250
chr1 115709412 115709422 LHX2 JASPAR yes 31713251
chr1 115709412 115709422 MNX1 JASPAR yes 31713252
chr1 115709412 115709422 RAX JASPAR yes 31713253
chr1 115709413 115709417 H1TF2 TRANSFAC yes 31713254
chr1 115709413 115709417 NFE TRANSFAC yes 31713255
chr1 115709413 115709417 SRF TRANSFAC yes 31713256
chr1 115709413 115709421 BARX1 JASPAR yes 31713257
chr1 115709413 115709421 BSX JASPAR yes 31713258
chr1 115709413 115709421 DLX6 JASPAR yes 31713259
chr1 115709413 115709421 ISX JASPAR yes 31713260
chr1 115709413 115709421 LBX1 JASPAR yes 31713261
chr1 115709413 115709421 LHX9 JASPAR yes 31713262
chr1 115709413 115709421 MSX1 JASPAR yes 31713263
chr1 115709413 115709421 MSX2 JASPAR yes 31713264
chr1 115709413 115709421 NKX6-2 JASPAR yes 31713265
chr1 115709413 115709421 PRRX1 JASPAR yes 31713266
chr1 115709413 115709421 RAX2 JASPAR yes 31713267
chr1 115709413 115709421 SHOX JASPAR yes 31713268
chr1 115709413 115709421 UNCX JASPAR yes 31713269
Genes associated with rs117960826[chr1:115709414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More