EnhancerDB
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  3. rs117967209[chr17:76933016]
Enhancers that have rs117967209[chr17:76933016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117967209[chr17:76933016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76932171 76933233 TCF7L2 GTRD no Colon (HCT116) 21795421
chr17 76932268 76933584 TCF7L2 GTRD no Colon (HCT116) 21795424
chr17 76932275 76933649 TCF7L2 GTRD no Colon (HCT116) 21795425
chr17 76932317 76933286 TCF7L2 GTRD no Colon (HCT116) 21795426
chr17 76932949 76933479 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795430
chr17 76932991 76933507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795431
chr17 76933013 76933019 TCF4 TRANSFAC yes 56190573
chr17 76933014 76933026 FOXC2 JASPAR yes 56190574
Genes associated with rs117967209[chr17:76933016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More