EnhancerDB
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  3. rs117972030[chr1:9845216]
Enhancers that have rs117972030[chr1:9845216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs117972030[chr1:9845216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9845205 9845216 USF1 JASPAR yes 26677983
chr1 9845205 9845216 USF2 JASPAR yes 26677984
chr1 9845208 9845221 NFKB1 JASPAR yes 26677985
chr1 9845213 9845219 ZNF354C JASPAR yes 26677986
chr1 9845216 9845221 MYC TRANSFAC yes 26677987
Genes associated with rs117972030[chr1:9845216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More