EnhancerDB
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  3. rs117987955[chr2:236416767]
Enhancers that have rs117987955[chr2:236416767]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117987955[chr2:236416767]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236416762 236416772 HOXA13 JASPAR yes 81975712
chr2 236416762 236416772 HOXB13 JASPAR yes 81975713
chr2 236416762 236416772 HOXD13 JASPAR yes 81975714
chr2 236416762 236416773 HOXA10 JASPAR yes 81975715
chr2 236416763 236416772 CDX1 JASPAR yes 81975716
Genes associated with rs117987955[chr2:236416767], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More