EnhancerDB
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  3. rs118024327[chr17:70421900]
Enhancers that have rs118024327[chr17:70421900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs118024327[chr17:70421900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 21785114
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 108290127
chr17 70421780 70422164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785115
chr17 70421780 70422164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290128
chr17 70421780 70422218 RELA UCSC Txn Factor no Conserved 108290129
chr17 70421856 70422236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785116
chr17 70421856 70422236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290130
chr17 70421865 70422033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785117
chr17 70421865 70422033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290131
chr17 70421891 70421901 RELA JASPAR yes 55786789
chr17 70421891 70421902 NFKB1 JASPAR yes 55786790
chr17 70421895 70421909 EBF1 JASPAR yes 55786791
chr17 70421897 70421908 EBF1 JASPAR yes 55786792
Genes associated with rs118024327[chr17:70421900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More