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- rs118028525[chr12:110809435]
Enhancers that have rs118028525[chr12:110809435]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
110802685 |
110813399 |
enh51400 |
|
|
| chr12 |
110809213 |
110809452 |
vista14875 |
|
|
Transcript factors that have rs118028525[chr12:110809435]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
110808946
|
110809896
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108059120
|
|
|
chr12
|
110809080
|
110809699
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108059121
|
|
|
chr12
|
110809083
|
110809743
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059122
|
|
|
chr12
|
110809112
|
110809674
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108059123
|
|
|
chr12
|
110809124
|
110809596
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108059124
|
|
|
chr12
|
110809211
|
110809532
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108059126
|
|
|
chr12
|
110809217
|
110809547
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059127
|
|
|
chr12
|
110809221
|
110809541
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059128
|
|
|
chr12
|
110809227
|
110809531
|
EBF1
|
UCSC Txn Factor
|
no
|
Conserved
|
108059129
|
|
|
chr12
|
110809227
|
110809531
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059130
|
|
|
chr12
|
110809229
|
110809606
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108059131
|
|
|
chr12
|
110809245
|
110809555
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059132
|
|
|
chr12
|
110809249
|
110809513
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059133
|
|
|
chr12
|
110809254
|
110809534
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059134
|
|
|
chr12
|
110809258
|
110809638
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059135
|
|
|
chr12
|
110809265
|
110809861
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059136
|
|
|
chr12
|
110809288
|
110809493
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059137
|
|
|
chr12
|
110809297
|
110809517
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059138
|
|
|
chr12
|
110809310
|
110809462
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108059139
|
|
|
chr12
|
110809412
|
110809932
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108059140
|
|
Genes associated with rs118028525[chr12:110809435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
110718561
|
110788898
|
+
|
ATP2A2
|
ENSG00000174437.12
|
110718561
|
20537
|
Uterus
|
0.425596
|
12524
|
|
|
chr12
|
111065646
|
111142755
|
-
|
HVCN1
|
ENSG00000122986.9
|
111142755
|
256211
|
Adrenal
|
0.331534
|
12533
|
|