EnhancerDB
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  3. rs11804557[chr1:25023130]
Enhancers that have rs11804557[chr1:25023130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11804557[chr1:25023130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25023118 25023135 PAX1 JASPAR yes 27519529
chr1 25023118 25023135 PAX9 JASPAR yes 27519530
chr1 25023120 25023134 PAX6 JASPAR yes 27519531
chr1 25023125 25023135 TBR1 JASPAR yes 27519532
chr1 25023129 25023138 NKX2-8 JASPAR yes 27519533
Genes associated with rs11804557[chr1:25023130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More