EnhancerDB
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  3. rs118090684[chr16:1347520]
Enhancers that have rs118090684[chr16:1347520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs118090684[chr16:1347520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 21684673
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 108171370
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 21684675
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 108171371
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 21684676
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 108171372
chr16 1345682 1347975 ZBTB33 GTRD no Lung (A549) 108171373
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 21684680
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 108171375
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 21684682
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 108171377
chr16 1346288 1347884 ZNF143 GTRD no Epithelial (MCF-7) 21684683
chr16 1346288 1347884 ZNF143 GTRD no Epithelial (MCF-7) 108171378
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 21684684
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 108171379
chr16 1346412 1347923 ZNF143 GTRD no Epithelial (MCF-7) 21684685
chr16 1346412 1347923 ZNF143 GTRD no Epithelial (MCF-7) 108171380
chr16 1346509 1347945 ZNF274 GTRD no Blood (GM12878) 108171381
chr16 1346608 1347742 ZNF274 GTRD no Bone Marrow (K562) 108171382
chr16 1346644 1347712 ZBTB33 GTRD no Brain (SK-N-SH) 108171384
chr16 1346669 1347694 ZBTB33 GTRD no Lung (A549) 108171385
chr16 1346699 1347543 ZNF274 GTRD no Bone Marrow (K562) 108171387
chr16 1346737 1347728 ZBTB33 GTRD no Lung (A549) 108171389
chr16 1346764 1347570 ZNF274 GTRD no Cervix (HeLa-S3) 21684688
chr16 1346764 1347570 ZNF274 GTRD no Cervix (HeLa-S3) 108171391
chr16 1346824 1347553 ZBTB33 GTRD no Lung (A549) 108171396
chr16 1346837 1347625 ZNF274 GTRD no Blood (GM12878) 108171397
chr16 1346988 1347553 GATA3 UCSC Txn Factor no Conserved 108171405
chr16 1347083 1347553 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21684715
chr16 1347083 1347553 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108171407
chr16 1347117 1348028 P63 GTRD no Skin (Keratinocyte) 21684716
chr16 1347117 1348028 P63 GTRD no Skin (Keratinocyte) 108171408
chr16 1347156 1348182 P63 GTRD no Skin (Keratinocyte) 21684717
chr16 1347156 1348182 P63 GTRD no Skin (Keratinocyte) 108171409
chr16 1347188 1348121 P63 GTRD no Skin (Keratinocyte) 21684718
chr16 1347188 1348121 P63 GTRD no Skin (Keratinocyte) 108171410
chr16 1347287 1347965 P63 GTRD no Skin (Keratinocyte) 21684719
chr16 1347287 1347965 P63 GTRD no Skin (Keratinocyte) 108171411
chr16 1347294 1348893 ZNF143 GTRD no Epithelial (MCF-7) 21684720
chr16 1347294 1348893 ZNF143 GTRD no Epithelial (MCF-7) 108171412
chr16 1347517 1347522 GATA2 JASPAR yes 9149905
Genes associated with rs118090684[chr16:1347520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More