EnhancerDB
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  3. rs11880408[chr19:10929774]
Enhancers that have rs11880408[chr19:10929774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10918125 10930655 enh17917
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Placenta Uterus Blood (T-cell) Stomach
Transcript factors that have rs11880408[chr19:10929774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10927087 10929947 ZNF143 GTRD no Epithelial (MCF-7) 108383872
chr19 10927114 10930021 ZNF143 GTRD no Epithelial (MCF-7) 108383873
chr19 10927128 10929912 ZNF143 GTRD no Epithelial (MCF-7) 108383874
chr19 10927148 10930149 ZNF274 GTRD no Blood (GM12878) 108383875
chr19 10927161 10929916 TCF7L2 GTRD no Colon (HCT116) 108383876
chr19 10927179 10930266 ZNF274 GTRD no Blood (GM12878) 108383877
chr19 10927206 10930021 ZNF274 GTRD no Blood (GM12878) 108383878
chr19 10927233 10930002 ZNF143 GTRD no Epithelial (MCF-7) 108383879
chr19 10927337 10930275 ZNF274 GTRD no Bone Marrow (K562) 21849014
chr19 10927337 10930275 ZNF274 GTRD no Bone Marrow (K562) 108383881
chr19 10927338 10929981 ZNF143 GTRD no Epithelial (MCF-7) 108383882
chr19 10927372 10929966 ZNF274 GTRD no Blood (GM12878) 108383884
chr19 10927378 10929924 ZNF143 GTRD no Epithelial (MCF-7) 108383885
chr19 10927398 10929944 TCF7L2 GTRD no Colon (HCT116) 108383886
chr19 10927404 10929864 ZNF274 GTRD no Bone Marrow (K562) 21849015
chr19 10927404 10929864 ZNF274 GTRD no Bone Marrow (K562) 108383887
chr19 10927460 10929890 TCF7L2 GTRD no Colon (HCT116) 108383889
chr19 10927477 10929944 TCF7L2 GTRD no Colon (HCT116) 108383890
chr19 10927496 10930196 ZNF274 GTRD no Liver (HepG2) 108383892
chr19 10927499 10930076 ZNF274 GTRD no Bone Marrow (K562) 21849016
chr19 10927499 10930076 ZNF274 GTRD no Bone Marrow (K562) 108383893
chr19 10927516 10929930 TCF7L2 GTRD no Colon (HCT116) 108383894
chr19 10927537 10929943 TCF7L2 GTRD no Colon (HCT116) 108383895
chr19 10927550 10930237 ZNF274 GTRD no Bone Marrow (K562) 21849018
chr19 10927550 10930237 ZNF274 GTRD no Bone Marrow (K562) 108383898
chr19 10927558 10930061 ZNF274 GTRD no Bone Marrow (K562) 21849019
chr19 10927558 10930061 ZNF274 GTRD no Bone Marrow (K562) 108383899
chr19 10927606 10929937 ZNF274 GTRD no Liver (HepG2) 108383900
chr19 10927619 10929832 ZNF143 GTRD no Epithelial (MCF-7) 108383903
chr19 10927626 10929868 ZNF274 GTRD no Bone Marrow (K562) 21849023
chr19 10927626 10929868 ZNF274 GTRD no Bone Marrow (K562) 108383905
chr19 10927632 10929833 ZNF274 GTRD no Bone Marrow (K562) 21849024
chr19 10927632 10929833 ZNF274 GTRD no Bone Marrow (K562) 108383908
chr19 10927645 10929796 ZNF274 GTRD no Liver (HepG2) 108383912
chr19 10928064 10929780 ZNF274 GTRD no Liver (HepG2) 108383941
chr19 10928105 10929777 TCF7L2 GTRD no Colon (HCT116) 108383948
chr19 10928198 10929828 ZNF274 GTRD no Liver (HepG2) 108383957
chr19 10928286 10929830 ZNF274 GTRD no Liver (HepG2) 108383970
chr19 10928637 10929961 ZNF274 GTRD no Bone Marrow (K562) 21849075
chr19 10928637 10929961 ZNF274 GTRD no Bone Marrow (K562) 108384134
chr19 10928637 10929979 ZNF274 GTRD no Bone Marrow (K562) 21849076
chr19 10928637 10929979 ZNF274 GTRD no Bone Marrow (K562) 108384135
chr19 10929764 10929777 SMAD2 JASPAR yes 112441393
Genes associated with rs11880408[chr19:10929774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 10982189 11033453 + CARM1 ENSG00000142453.7 10982189 52415 Esophagus 0.028327 17025
chr19 11531272 11546603 - CCDC151 ENSG00000198003.7 11546603 601498 Heart 0.185973 17042