EnhancerDB
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  3. rs11888596[chr2:201628314]
Enhancers that have rs11888596[chr2:201628314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201603725 201634495 enh19115
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Thymus Heart
Transcript factors that have rs11888596[chr2:201628314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201628307 201628317 HESX1 JASPAR yes 80125770
chr2 201628307 201628317 RAX JASPAR yes 80125771
chr2 201628308 201628316 DLX6 JASPAR yes 80125772
chr2 201628308 201628316 MSX2 JASPAR yes 80125773
chr2 201628310 201628320 NFIA JASPAR yes 80125774
chr2 201628312 201628318 NFIC JASPAR yes 80125775
chr2 201628314 201628327 ZBTB18 JASPAR yes 80125776
Genes associated with rs11888596[chr2:201628314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More