EnhancerDB
  1. Home
  2. SNP
  3. rs11955888[chr5:171531259]
Enhancers that have rs11955888[chr5:171531259]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11955888[chr5:171531259]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171531243 171531264 ZNF263 JASPAR yes 67762917
chr5 171531246 171531267 ZNF263 JASPAR yes 67762919
chr5 171531254 171531264 SP1 JASPAR yes 67762920
Genes associated with rs11955888[chr5:171531259], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More