EnhancerDB
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  3. rs11960420[chr5:179253562]
Enhancers that have rs11960420[chr5:179253562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179241645 179258975 enh22874
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs11960420[chr5:179253562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179253549 179253564 NR2C2 JASPAR yes 68191628
chr5 179253550 179253564 RXRB JASPAR yes 68191629
chr5 179253550 179253564 RXRG JASPAR yes 68191630
chr5 179253558 179253572 BATF3 JASPAR yes 68191631
Genes associated with rs11960420[chr5:179253562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More