EnhancerDB
  1. Home
  2. SNP
  3. rs11970539[chr6:12575317]
Enhancers that have rs11970539[chr6:12575317]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12568008 12581461 enh23038
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs11970539[chr6:12575317]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12575314 12575319 GATA2 JASPAR yes 99981212
chr6 12575317 12575327 HOXA13 JASPAR yes 99981213
chr6 12575317 12575327 HOXB13 JASPAR yes 99981214
chr6 12575317 12575327 HOXD13 JASPAR yes 99981215
Genes associated with rs11970539[chr6:12575317], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More