EnhancerDB
  1. Home
  2. SNP
  3. rs12040776[chr1:115710214]
Enhancers that have rs12040776[chr1:115710214]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs12040776[chr1:115710214]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 21330708
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823458
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823459
chr1 115710199 115710220 IRF1 JASPAR yes 31713387
chr1 115710199 115711918 ZNF143 GTRD no Epithelial (MCF-7) 21330709
chr1 115710201 115710216 PRDM1 JASPAR yes 31713389
chr1 115710213 115710220 NKX3-1 JASPAR yes 31713390
Genes associated with rs12040776[chr1:115710214], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More