EnhancerDB
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  3. rs12041027[chr1:202050988]
Enhancers that have rs12041027[chr1:202050988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12041027[chr1:202050988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202050328 202051016 TCF7L2 GTRD no Colon (HCT116) 21366698
chr1 202050986 202051000 POU1F1 JASPAR yes 34550979
chr1 202050987 202050999 POU3F1 JASPAR yes 34550980
chr1 202050987 202050999 POU3F2 JASPAR yes 34550981
chr1 202050987 202051000 POU2F2 JASPAR yes 34550982
Genes associated with rs12041027[chr1:202050988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More