EnhancerDB
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  3. rs12041822[chr1:31504061]
Enhancers that have rs12041822[chr1:31504061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31495565 31517775 enh193
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
Transcript factors that have rs12041822[chr1:31504061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31503747 31504368 TCF7L2 GTRD no Colon (HCT116) 107802716
chr1 31504050 31504062 POU2F1 JASPAR yes 27900683
chr1 31504051 31504064 POU2F2 JASPAR yes 27900684
chr1 31504052 31504061 POU5F1B JASPAR yes 27900685
Genes associated with rs12041822[chr1:31504061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More