EnhancerDB
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Enhancers that have rs12042037[chr1:203661573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203658645 203666475 enh12564
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203660971 203662806 vista126
VISTA
Transcript factors that have rs12042037[chr1:203661573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203661051 203662299 AR GTRD no Prostate (PC-3) 21369827
chr1 203661051 203662299 AR GTRD no Prostate (PC-3) 107686544
chr1 203661051 203662299 AR GTRD no Prostate (PC-3) 107859338
chr1 203661203 203662019 TCF7L2 GTRD no Colon (HCT116) 21369828
chr1 203661203 203662019 TCF7L2 GTRD no Colon (HCT116) 107859339
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 21369829
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 107859340
chr1 203661295 203662286 TCF7L2 GTRD no Colon (HCT116) 21369830
chr1 203661295 203662286 TCF7L2 GTRD no Colon (HCT116) 107859341
chr1 203661364 203661973 TCF7L2 GTRD no Colon (HCT116) 21369831
chr1 203661364 203661973 TCF7L2 GTRD no Colon (HCT116) 107859342
chr1 203661456 203662125 TCF7L2 GTRD no Colon (HCT116) 21369832
chr1 203661456 203662125 TCF7L2 GTRD no Colon (HCT116) 107859343
chr1 203661462 203661927 ZNF274 GTRD no Cervix (HeLa-S3) 21369833
chr1 203661462 203661927 ZNF274 GTRD no Cervix (HeLa-S3) 107859344
chr1 203661478 203661954 ZNF274 GTRD no Cervix (HeLa-S3) 21369834
chr1 203661478 203661954 ZNF274 GTRD no Cervix (HeLa-S3) 107859345
chr1 203661481 203662111 ZNF143 GTRD no Epithelial (MCF-7) 21369835
chr1 203661481 203662111 ZNF143 GTRD no Epithelial (MCF-7) 107859346
chr1 203661490 203661906 ZNF274 GTRD no Cervix (HeLa-S3) 21369836
chr1 203661490 203661906 ZNF274 GTRD no Cervix (HeLa-S3) 107859347
chr1 203661502 203661947 TCF7L2 GTRD no Colon (HCT116) 21369837
chr1 203661502 203661947 TCF7L2 GTRD no Colon (HCT116) 107859348
chr1 203661536 203661983 ZNF143 GTRD no Epithelial (MCF-7) 21369838
chr1 203661536 203661983 ZNF143 GTRD no Epithelial (MCF-7) 107859349
chr1 203661561 203662011 ZNF143 GTRD no Epithelial (MCF-7) 21369839
chr1 203661561 203662011 ZNF143 GTRD no Epithelial (MCF-7) 107859350
chr1 203661572 203662012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369840
chr1 203661572 203662012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859351
chr1 203661572 203662114 TCF7L2 GTRD no Colon (HCT116) 21369841
chr1 203661572 203662114 TCF7L2 GTRD no Colon (HCT116) 107859352
Genes associated with rs12042037[chr1:203661573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More