EnhancerDB
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  3. rs12042407[chr1:113183879]
Enhancers that have rs12042407[chr1:113183879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113174365 113185519 enh568
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (A549) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs12042407[chr1:113183879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113183863 113183884 IRF1 JASPAR yes 31584350
chr1 113183875 113183888 POU3F3 JASPAR yes 31584352
chr1 113183875 113183889 POU1F1 JASPAR yes 31584353
Genes associated with rs12042407[chr1:113183879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More