EnhancerDB
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  3. rs12042792[chr1:3237649]
Enhancers that have rs12042792[chr1:3237649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12042792[chr1:3237649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3237641 3237661 RREB1 JASPAR yes 26279530
chr1 3237645 3237655 TBX21 JASPAR yes 26279531
chr1 3237645 3237656 TBX20 JASPAR yes 26279532
chr1 3237645 3237658 EOMES JASPAR yes 26279533
chr1 3237646 3237654 MGA JASPAR yes 26279534
chr1 3237646 3237654 TBX15 JASPAR yes 26279535
chr1 3237646 3237654 TBX1 JASPAR yes 26279536
chr1 3237646 3237654 TBX4 JASPAR yes 26279537
chr1 3237646 3237654 TBX5 JASPAR yes 26279538
Genes associated with rs12042792[chr1:3237649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More