EnhancerDB
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  3. rs12042829[chr1:221896456]
Enhancers that have rs12042829[chr1:221896456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221879328 221909475 enh12696
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Heart
Transcript factors that have rs12042829[chr1:221896456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221896454 221896466 BHLHE23 JASPAR yes 35561935
chr1 221896455 221896465 BHLHE22 JASPAR yes 35561936
chr1 221896455 221896465 OLIG1 JASPAR yes 35561937
chr1 221896455 221896465 OLIG2 JASPAR yes 35561938
chr1 221896455 221896465 OLIG3 JASPAR yes 35561939
chr1 221896455 221896467 TAL1 JASPAR yes 35561940
Genes associated with rs12042829[chr1:221896456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More