EnhancerDB
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  3. rs12042882[chr1:3238014]
Enhancers that have rs12042882[chr1:3238014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12042882[chr1:3238014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3238000 3238020 RREB1 JASPAR yes 26279573
chr1 3238001 3238021 RREB1 JASPAR yes 26279574
chr1 3238002 3238022 RREB1 JASPAR yes 26279575
chr1 3238006 3238021 RUNX2 JASPAR yes 26279576
chr1 3238009 3238023 GLIS2 JASPAR yes 26279577
chr1 3238009 3238023 GLIS3 JASPAR yes 26279578
Genes associated with rs12042882[chr1:3238014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More