EnhancerDB
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  3. rs12050934[chr16:88302897]
Enhancers that have rs12050934[chr16:88302897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs12050934[chr16:88302897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88302300 88303727 TCF7L2 GTRD no Colon (HCT116) 21735724
chr16 88302375 88303197 TCF7L2 GTRD no Colon (HCT116) 21735725
chr16 88302520 88304633 TCF7L2 GTRD no Colon (HCT116) 21735726
chr16 88302772 88304701 ZNF143 GTRD no Epithelial (MCF-7) 21735727
chr16 88302895 88302902 E2F1 TRANSFAC yes 12272404
Genes associated with rs12050934[chr16:88302897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More