EnhancerDB
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  3. rs12057392[chr1:10966114]
Enhancers that have rs12057392[chr1:10966114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
chr1 10965129 10966144 vista14
VISTA
Transcript factors that have rs12057392[chr1:10966114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10963814 10966661 ZNF274 GTRD no Blood (GM12878) 107686487
chr1 10966102 10966123 ZNF263 JASPAR yes 26759577
chr1 10966102 10966123 ZNF263 JASPAR yes 71121545
chr1 10966113 10966119 SP1 TRANSFAC yes 26759578
chr1 10966113 10966119 SP1 TRANSFAC yes 71121546
chr1 10966113 10966123 SP1 JASPAR yes 26759579
chr1 10966113 10966123 SP1 JASPAR yes 71121547
Genes associated with rs12057392[chr1:10966114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 11006528 11042094 - C1orf127 ENSG00000175262.10 11042094 40414 Breast 0.446355 142
chr1 11006528 11042094 - C1orf127 ENSG00000175262.10 11042094 40414 Liver 0.20509 142