EnhancerDB
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  3. rs12058097[chr1:235454268]
Enhancers that have rs12058097[chr1:235454268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235448657 235464435 enh12801
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12058097[chr1:235454268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235454258 235454268 HOXB13 JASPAR yes 36361120
chr1 235454258 235454268 HOXD13 JASPAR yes 36361121
chr1 235454258 235454269 HOXA10 JASPAR yes 36361122
chr1 235454259 235454269 ALX3 JASPAR yes 36361123
chr1 235454259 235454269 EMX1 JASPAR yes 36361124
chr1 235454259 235454269 EMX2 JASPAR yes 36361125
chr1 235454259 235454269 ESX1 JASPAR yes 36361126
chr1 235454259 235454269 GBX2 JASPAR yes 36361127
chr1 235454259 235454269 GSX1 JASPAR yes 36361128
chr1 235454259 235454269 GSX2 JASPAR yes 36361129
chr1 235454259 235454269 HESX1 JASPAR yes 36361130
chr1 235454259 235454269 HOXB2 JASPAR yes 36361131
chr1 235454259 235454269 HOXB3 JASPAR yes 36361132
chr1 235454259 235454269 LBX2 JASPAR yes 36361133
chr1 235454259 235454269 LHX2 JASPAR yes 36361134
chr1 235454259 235454269 LHX6 JASPAR yes 36361135
chr1 235454259 235454269 MEOX1 JASPAR yes 36361136
chr1 235454259 235454269 MEOX2 JASPAR yes 36361137
chr1 235454259 235454269 MIXL1 JASPAR yes 36361138
chr1 235454259 235454269 MNX1 JASPAR yes 36361139
chr1 235454259 235454269 NOTO JASPAR yes 36361140
chr1 235454259 235454269 RAX JASPAR yes 36361141
chr1 235454260 235454268 BSX JASPAR yes 36361142
chr1 235454260 235454268 DLX6 JASPAR yes 36361143
chr1 235454260 235454268 EN1 JASPAR yes 36361144
chr1 235454260 235454268 ISX JASPAR yes 36361145
chr1 235454260 235454268 LBX1 JASPAR yes 36361146
chr1 235454260 235454268 LHX9 JASPAR yes 36361147
chr1 235454260 235454268 LMX1A JASPAR yes 36361148
chr1 235454260 235454268 LMX1B JASPAR yes 36361149
chr1 235454260 235454268 NKX6-1 JASPAR yes 36361150
chr1 235454260 235454268 NKX6-2 JASPAR yes 36361151
chr1 235454260 235454268 PAX4 JASPAR yes 36361152
chr1 235454260 235454268 PDX1 JASPAR yes 36361153
chr1 235454260 235454268 PRRX1 JASPAR yes 36361154
chr1 235454260 235454268 RAX2 JASPAR yes 36361155
chr1 235454260 235454268 SHOX JASPAR yes 36361156
chr1 235454260 235454268 UNCX JASPAR yes 36361157
chr1 235454260 235454268 VAX1 JASPAR yes 36361158
chr1 235454260 235454268 VAX2 JASPAR yes 36361159
chr1 235454260 235454268 VSX1 JASPAR yes 36361160
chr1 235454260 235454268 VSX2 JASPAR yes 36361161
chr1 235454260 235454270 POU6F2 JASPAR yes 36361162
chr1 235454267 235454276 HIC2 JASPAR yes 36361163
Genes associated with rs12058097[chr1:235454268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More