EnhancerDB
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  3. rs12061043[chr1:226086818]
Enhancers that have rs12061043[chr1:226086818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226082305 226089228 enh47300
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs12061043[chr1:226086818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226086704 226087374 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107875214
chr1 226086804 226086819 HNF4A JASPAR yes 35777668
chr1 226086805 226086819 NR2F1 JASPAR yes 35777669
chr1 226086805 226086819 RXRB JASPAR yes 35777670
chr1 226086805 226086819 RXRG JASPAR yes 35777671
chr1 226086805 226086820 HNF4G JASPAR yes 35777672
chr1 226086805 226086820 NR2C2 JASPAR yes 35777673
chr1 226086808 226086821 NR2F1 JASPAR yes 35777674
chr1 226086812 226086827 HNF4G JASPAR yes 35777675
chr1 226086818 226086833 FOXP1 JASPAR yes 35777676
Genes associated with rs12061043[chr1:226086818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More