EnhancerDB
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  3. rs12062246[chr1:230960371]
Enhancers that have rs12062246[chr1:230960371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230955927 230966181 enh12773
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Breast Thyroid Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs12062246[chr1:230960371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230960174 230960514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391751
chr1 230960371 230960386 TFAP2A JASPAR yes 36064907
chr1 230960371 230960386 TFAP2C JASPAR yes 36064908
Genes associated with rs12062246[chr1:230960371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More