EnhancerDB
  1. Home
  2. SNP
  3. rs12065459[chr1:172788581]
Enhancers that have rs12065459[chr1:172788581]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172784470 172799215 enh732
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs12065459[chr1:172788581]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172787943 172788629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350270
chr1 172787943 172788629 NFIC UCSC Txn Factor no Conserved 107846102
chr1 172787943 172788629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846103
chr1 172788030 172788620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350283
chr1 172788030 172788620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846120
chr1 172788031 172788710 ATF2 UCSC Txn Factor no Conserved 107846122
chr1 172788170 172788606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350304
chr1 172788170 172788606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846144
chr1 172788190 172788710 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350306
chr1 172788190 172788710 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846146
chr1 172788234 172788824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350308
chr1 172788234 172788824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846148
chr1 172788581 172788587 HiNF-A TRANSFAC yes 33153926
Genes associated with rs12065459[chr1:172788581], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More