EnhancerDB
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  3. rs12065966[chr1:172885617]
Enhancers that have rs12065966[chr1:172885617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs12065966[chr1:172885617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172885190 172886234 ZNF274 GTRD no Cervix (HeLa-S3) 21350440
chr1 172885274 172886257 ZNF274 GTRD no Cervix (HeLa-S3) 21350441
chr1 172885278 172886593 TCF7L2 GTRD no Colon (HCT116) 21350442
chr1 172885294 172885885 ZNF274 GTRD no Cervix (HeLa-S3) 21350443
chr1 172885352 172886710 TCF7L2 GTRD no Colon (HCT116) 21350444
chr1 172885360 172886434 TCF7L2 GTRD no Colon (HCT116) 21350445
chr1 172885399 172886238 ZNF274 GTRD no Cervix (HeLa-S3) 21350446
chr1 172885448 172885750 ZNF274 GTRD no Cervix (HeLa-S3) 21350447
Genes associated with rs12065966[chr1:172885617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More