EnhancerDB
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  3. rs12068260[chr1:201568267]
Enhancers that have rs12068260[chr1:201568267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs12068260[chr1:201568267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201566834 201568658 ZNF143 GTRD no Epithelial (MCF-7) 21365147
chr1 201566961 201568684 ZNF143 GTRD no Epithelial (MCF-7) 21365154
chr1 201568222 201569506 ZNF143 GTRD no Epithelial (MCF-7) 21365164
chr1 201568263 201568277 GLIS2 JASPAR yes 34511579
chr1 201568263 201568277 GLIS3 JASPAR yes 34511580
chr1 201568267 201568278 EBF1 JASPAR yes 34511581
Genes associated with rs12068260[chr1:201568267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More