EnhancerDB
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  3. rs12068506[chr1:25014809]
Enhancers that have rs12068506[chr1:25014809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12068506[chr1:25014809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25014802 25014813 USF2 JASPAR yes 27518351
chr1 25014803 25014813 TFEB JASPAR yes 27518352
chr1 25014803 25014813 TFEC JASPAR yes 27518353
chr1 25014803 25014814 USF1 JASPAR yes 27518354
chr1 25014806 25014820 BATF3 JASPAR yes 27518355
chr1 25014807 25014819 JDP2 JASPAR yes 27518356
Genes associated with rs12068506[chr1:25014809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More