EnhancerDB
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  3. rs12072108[chr1:113690254]
Enhancers that have rs12072108[chr1:113690254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113681205 113697995 enh27075
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Brain (SK-N-SH) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs12072108[chr1:113690254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113690249 113690259 HMBOX1 JASPAR yes 31616025
chr1 113690252 113690262 POU6F2 JASPAR yes 31616026
chr1 113690253 113690263 ALX3 JASPAR yes 31616027
chr1 113690253 113690263 ESX1 JASPAR yes 31616028
chr1 113690253 113690263 GSX2 JASPAR yes 31616029
chr1 113690253 113690263 HESX1 JASPAR yes 31616030
chr1 113690253 113690263 LHX6 JASPAR yes 31616031
chr1 113690253 113690263 MIXL1 JASPAR yes 31616032
chr1 113690253 113690263 MNX1 JASPAR yes 31616033
chr1 113690253 113690263 NOTO JASPAR yes 31616034
chr1 113690253 113690263 RAX JASPAR yes 31616035
chr1 113690254 113690262 ISX JASPAR yes 31616036
chr1 113690254 113690262 LMX1A JASPAR yes 31616037
chr1 113690254 113690262 LMX1B JASPAR yes 31616038
chr1 113690254 113690262 NKX6-1 JASPAR yes 31616039
chr1 113690254 113690262 NKX6-2 JASPAR yes 31616040
chr1 113690254 113690262 PRRX1 JASPAR yes 31616041
chr1 113690254 113690262 RAX2 JASPAR yes 31616042
chr1 113690254 113690262 SHOX JASPAR yes 31616043
chr1 113690254 113690262 UNCX JASPAR yes 31616044
chr1 113690254 113690262 VAX1 JASPAR yes 31616045
Genes associated with rs12072108[chr1:113690254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More