EnhancerDB
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  3. rs12073225[chr1:227953387]
Enhancers that have rs12073225[chr1:227953387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227936025 227954000 enh47302
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12073225[chr1:227953387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227952275 227954257 TCF7L2 GTRD no Colon (HCT116) 107876646
chr1 227953192 227954287 TCF7L2 GTRD no Colon (HCT116) 107876647
chr1 227953264 227954223 TCF7L2 GTRD no Colon (HCT116) 107876648
chr1 227953279 227954172 ZNF274 GTRD no Cervix (HeLa-S3) 21388167
chr1 227953279 227954172 ZNF274 GTRD no Cervix (HeLa-S3) 107876649
chr1 227953344 227954505 ZNF274 GTRD no Bone Marrow (K562) 21388168
chr1 227953344 227954505 ZNF274 GTRD no Bone Marrow (K562) 107876650
chr1 227953383 227954390 ZNF274 GTRD no Bone Marrow (K562) 21388169
chr1 227953383 227954390 ZNF274 GTRD no Bone Marrow (K562) 107876651
chr1 227953384 227953388 NFE TRANSFAC yes 35886698
chr1 227953384 227953389 GATA1 TRANSFAC yes 35886699
chr1 227953384 227953390 GATA3 JASPAR yes 35886700
Genes associated with rs12073225[chr1:227953387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More