EnhancerDB
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  3. rs12074560[chr1:117879387]
Enhancers that have rs12074560[chr1:117879387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117874505 117891355 enh12197
Prostate (PC-3) Large Intestine Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12074560[chr1:117879387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117879171 117879514 ZNF143 GTRD no Epithelial (MCF-7) 21334179
chr1 117879378 117879389 NFE2 JASPAR yes 31874298
chr1 117879380 117879397 RARA JASPAR yes 31874299
chr1 117879384 117879393 ZEB1 JASPAR yes 31874300
Genes associated with rs12074560[chr1:117879387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More