EnhancerDB
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  3. rs12076427[chr1:202063809]
Enhancers that have rs12076427[chr1:202063809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12076427[chr1:202063809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202062502 202063886 ZNF143 GTRD no Epithelial (MCF-7) 21367020
chr1 202062598 202063820 ZNF143 GTRD no Epithelial (MCF-7) 21367021
chr1 202062624 202063829 ZNF143 GTRD no Epithelial (MCF-7) 21367022
chr1 202062665 202063876 ZNF143 GTRD no Epithelial (MCF-7) 21367023
chr1 202063450 202064064 TCF7L2 GTRD no Colon (HCT116) 21367089
chr1 202063804 202063813 RUNX2 JASPAR yes 34553047
Genes associated with rs12076427[chr1:202063809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More