EnhancerDB
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  3. rs12078542[chr1:3470381]
Enhancers that have rs12078542[chr1:3470381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs12078542[chr1:3470381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3470378 3470383 SP1 TRANSFAC yes 26295301
chr1 3470381 3470385 LFA1 TRANSFAC yes 26295302
Genes associated with rs12078542[chr1:3470381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More