EnhancerDB
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  3. rs12079460[chr1:180552867]
Enhancers that have rs12079460[chr1:180552867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180547465 180559715 enh12426
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs12079460[chr1:180552867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180551760 180552875 ZNF274 GTRD no Bone Marrow (K562) 21353743
chr1 180551786 180553218 ZNF274 GTRD no Bone Marrow (K562) 21353744
chr1 180552262 180553336 ZNF143 GTRD no Epithelial (MCF-7) 21353751
chr1 180552271 180553283 ZNF143 GTRD no Epithelial (MCF-7) 21353752
chr1 180552303 180553161 ZNF143 GTRD no Epithelial (MCF-7) 21353753
chr1 180552338 180553320 ZNF143 GTRD no Epithelial (MCF-7) 21353754
chr1 180552352 180553176 ZNF143 GTRD no Epithelial (MCF-7) 21353755
chr1 180552362 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353756
chr1 180552388 180553244 ZNF143 GTRD no Epithelial (MCF-7) 21353757
chr1 180552399 180553205 ZNF143 GTRD no Epithelial (MCF-7) 21353758
chr1 180552402 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353759
chr1 180552413 180553446 ZNF143 GTRD no Epithelial (MCF-7) 21353760
chr1 180552452 180553257 ZNF143 GTRD no Epithelial (MCF-7) 21353761
chr1 180552454 180553230 ZNF143 GTRD no Epithelial (MCF-7) 21353762
chr1 180552474 180553241 ZNF143 GTRD no Epithelial (MCF-7) 21353763
chr1 180552489 180553053 ZNF143 GTRD no Epithelial (MCF-7) 21353764
chr1 180552517 180553125 ZNF143 GTRD no Epithelial (MCF-7) 21353765
chr1 180552581 180553204 ZNF143 GTRD no Epithelial (MCF-7) 21353766
chr1 180552592 180553134 ZNF143 GTRD no Epithelial (MCF-7) 21353767
chr1 180552610 180553135 ZNF143 GTRD no Epithelial (MCF-7) 21353768
chr1 180552857 180552868 DUX4 JASPAR yes 33528292
chr1 180552863 180552878 LEF1 JASPAR yes 33528293
Genes associated with rs12079460[chr1:180552867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More