EnhancerDB
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  3. rs12079473[chr1:6417490]
Enhancers that have rs12079473[chr1:6417490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6411925 6440995 enh26
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach
Transcript factors that have rs12079473[chr1:6417490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6417482 6417492 POU6F2 JASPAR yes 26394109
chr1 6417486 6417490 YY1 TRANSFAC yes 26394110
chr1 6417489 6417508 CTCF JASPAR yes 26394111
Genes associated with rs12079473[chr1:6417490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More