EnhancerDB
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  3. rs12079615[chr1:40457325]
Enhancers that have rs12079615[chr1:40457325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs12079615[chr1:40457325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40457313 40457331 MAFF JASPAR yes 28306066
chr1 40457316 40457327 CEBPB JASPAR yes 28306067
chr1 40457317 40457328 CEBPA JASPAR yes 28306068
chr1 40457321 40457331 EMX1 JASPAR yes 28306069
chr1 40457321 40457331 EVX2 JASPAR yes 28306070
chr1 40457321 40457331 HOXB2 JASPAR yes 28306071
chr1 40457321 40457331 MNX1 JASPAR yes 28306072
chr1 40457322 40457330 LMX1A JASPAR yes 28306073
chr1 40457322 40457330 LMX1B JASPAR yes 28306074
chr1 40457322 40457330 NKX6-1 JASPAR yes 28306075
chr1 40457322 40457330 NKX6-2 JASPAR yes 28306076
chr1 40457322 40457330 VAX1 JASPAR yes 28306077
chr1 40457322 40457330 VAX2 JASPAR yes 28306078
chr1 40457322 40457330 VSX1 JASPAR yes 28306079
chr1 40457322 40457330 VSX2 JASPAR yes 28306080
chr1 40457322 40457332 POU6F2 JASPAR yes 28306081
Genes associated with rs12079615[chr1:40457325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More