EnhancerDB
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  3. rs12079977[chr1:202062114]
Enhancers that have rs12079977[chr1:202062114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12079977[chr1:202062114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202061920 202063680 ZNF274 GTRD no Cervix (HeLa-S3) 21367016
chr1 202062097 202062117 RREB1 JASPAR yes 34552851
chr1 202062097 202062118 IRF1 JASPAR yes 34552852
chr1 202062097 202062505 ZNF274 GTRD no Cervix (HeLa-S3) 21367017
chr1 202062098 202062119 IRF1 JASPAR yes 34552855
chr1 202062099 202062114 STAT2 JASPAR yes 34552856
chr1 202062102 202062114 IRF1 JASPAR yes 34552857
chr1 202062102 202062116 IRF7 JASPAR yes 34552858
chr1 202062103 202062123 RREB1 JASPAR yes 34552859
chr1 202062103 202062124 IRF1 JASPAR yes 34552860
chr1 202062104 202062119 FOXP1 JASPAR yes 34552862
chr1 202062104 202062125 IRF1 JASPAR yes 34552863
chr1 202062107 202062122 IRF9 JASPAR yes 34552864
chr1 202062108 202062120 IRF1 JASPAR yes 34552865
chr1 202062108 202062122 IRF7 JASPAR yes 34552866
chr1 202062109 202062130 IRF1 JASPAR yes 34552867
chr1 202062110 202062116 TCF4 TRANSFAC yes 34552868
chr1 202062110 202062125 RUNX2 JASPAR yes 34552869
chr1 202062113 202062125 IRF1 JASPAR yes 34552870
Genes associated with rs12079977[chr1:202062114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More