EnhancerDB
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  3. rs12085777[chr1:172889177]
Enhancers that have rs12085777[chr1:172889177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs12085777[chr1:172889177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172889172 172889182 MAX JASPAR yes 33166476
chr1 172889172 172889182 MLXIPL JASPAR yes 33166477
chr1 172889172 172889182 MLX JASPAR yes 33166478
chr1 172889172 172889182 MNT JASPAR yes 33166479
chr1 172889172 172889182 TFE3 JASPAR yes 33166480
chr1 172889173 172889183 MAX JASPAR yes 33166481
chr1 172889174 172889179 MYC TRANSFAC yes 33166482
chr1 172889174 172889179 USF1 TRANSFAC yes 33166483
chr1 172889174 172889179 USF2 TRANSFAC yes 33166484
chr1 172889174 172889181 USF1 JASPAR yes 33166485
Genes associated with rs12085777[chr1:172889177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More