EnhancerDB
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  3. rs12086220[chr1:117094222]
Enhancers that have rs12086220[chr1:117094222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117093904 117107375 enh27099
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs12086220[chr1:117094222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117094209 117094230 IRF1 JASPAR yes 31818765
chr1 117094211 117094226 PRDM1 JASPAR yes 31818766
chr1 117094211 117094226 STAT2 JASPAR yes 31818767
chr1 117094212 117094226 STAT1 JASPAR yes 31818768
chr1 117094213 117094225 IRF1 JASPAR yes 31818769
chr1 117094213 117094227 IRF7 JASPAR yes 31818770
chr1 117094213 117094227 IRF8 JASPAR yes 31818771
chr1 117094213 117094228 IRF9 JASPAR yes 31818772
chr1 117094215 117094236 IRF1 JASPAR yes 31818773
Genes associated with rs12086220[chr1:117094222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More