EnhancerDB
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  3. rs12088124[chr1:15522936]
Enhancers that have rs12088124[chr1:15522936]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12088124[chr1:15522936]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15522920 15522941 IRF1 JASPAR yes 26969409
chr1 15522922 15522943 ZNF263 JASPAR yes 26969410
chr1 15522924 15522939 PRDM1 JASPAR yes 26969411
chr1 15522925 15522946 ZNF263 JASPAR yes 26969412
chr1 15522927 15522948 ZNF263 JASPAR yes 26969413
chr1 15522929 15522950 ZNF263 JASPAR yes 26969414
chr1 15522932 15522953 ZNF263 JASPAR yes 26969415
chr1 15522935 15522945 SP1 JASPAR yes 26969416
Genes associated with rs12088124[chr1:15522936], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More