EnhancerDB
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  3. rs12089279[chr1:52001486]
Enhancers that have rs12089279[chr1:52001486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12089279[chr1:52001486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52001477 52001487 SP1 JASPAR yes 28846930
chr1 52001478 52001488 SP1 JASPAR yes 28846932
chr1 52001483 52001488 SP1 TRANSFAC yes 28846933
Genes associated with rs12089279[chr1:52001486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More