EnhancerDB
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  3. rs12089489[chr1:28462045]
Enhancers that have rs12089489[chr1:28462045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28446825 28468055 enh182
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
Transcript factors that have rs12089489[chr1:28462045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28462035 28462050 IRF9 JASPAR yes 27745121
Genes associated with rs12089489[chr1:28462045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27681675 27693383 - MAP3K6 ENSG00000142733.10 27693383 768662 Breast 0.376357 388