EnhancerDB
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  3. rs12093896[chr1:17872809]
Enhancers that have rs12093896[chr1:17872809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs12093896[chr1:17872809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17872803 17872813 EN2 JASPAR yes 27099860
chr1 17872803 17872813 ESX1 JASPAR yes 27099861
chr1 17872803 17872813 GBX1 JASPAR yes 27099862
chr1 17872803 17872813 GBX2 JASPAR yes 27099863
chr1 17872803 17872813 HESX1 JASPAR yes 27099864
chr1 17872803 17872813 LBX2 JASPAR yes 27099865
chr1 17872803 17872813 LHX2 JASPAR yes 27099866
chr1 17872803 17872813 MIXL1 JASPAR yes 27099867
chr1 17872803 17872813 RAX JASPAR yes 27099868
chr1 17872804 17872812 LHX9 JASPAR yes 27099869
chr1 17872804 17872812 SHOX JASPAR yes 27099870
chr1 17872804 17872813 VENTX JASPAR yes 27099871
Genes associated with rs12093896[chr1:17872809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More