EnhancerDB
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  3. rs12094346[chr1:172460239]
Enhancers that have rs12094346[chr1:172460239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172440585 172461255 enh12372
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs12094346[chr1:172460239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172459851 172460862 P63 GTRD no Skin (Keratinocyte) 21350019
chr1 172459965 172460674 P63 GTRD no Skin (Keratinocyte) 21350020
chr1 172460072 172460555 ZNF143 GTRD no Epithelial (MCF-7) 21350021
chr1 172460157 172460826 P63 GTRD no Skin (Keratinocyte) 21350022
chr1 172460159 172460621 ZNF143 GTRD no Epithelial (MCF-7) 21350023
chr1 172460203 172460738 P63 GTRD no Skin (Keratinocyte) 21350024
chr1 172460214 172460475 ZNF143 GTRD no Epithelial (MCF-7) 21350025
chr1 172460230 172460551 ZNF143 GTRD no Epithelial (MCF-7) 21350026
chr1 172460232 172460247 ESR2 JASPAR yes 33133084
chr1 172460237 172460250 NR2F1 JASPAR yes 33133085
chr1 172460239 172460250 ESRRA JASPAR yes 33133086
chr1 172460239 172460250 ESRRB JASPAR yes 33133087
Genes associated with rs12094346[chr1:172460239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More