EnhancerDB
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  3. rs12096563[chr1:202063222]
Enhancers that have rs12096563[chr1:202063222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12096563[chr1:202063222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202061920 202063680 ZNF274 GTRD no Cervix (HeLa-S3) 21367016
chr1 202062502 202063886 ZNF143 GTRD no Epithelial (MCF-7) 21367020
chr1 202062598 202063820 ZNF143 GTRD no Epithelial (MCF-7) 21367021
chr1 202062624 202063829 ZNF143 GTRD no Epithelial (MCF-7) 21367022
chr1 202062665 202063876 ZNF143 GTRD no Epithelial (MCF-7) 21367023
chr1 202062685 202063624 ZNF143 GTRD no Epithelial (MCF-7) 21367024
chr1 202062692 202063562 ZNF274 GTRD no Bone Marrow (K562) 21367025
chr1 202062801 202063593 ZNF274 GTRD no Cervix (HeLa-S3) 21367026
chr1 202062809 202063589 ZNF274 GTRD no Cervix (HeLa-S3) 21367027
chr1 202062825 202063605 ZNF274 GTRD no Bone Marrow (K562) 21367028
chr1 202062875 202063570 ZNF274 GTRD no Cervix (HeLa-S3) 21367029
chr1 202062875 202063664 ZNF274 GTRD no Bone Marrow (K562) 21367030
chr1 202062881 202063587 ZNF274 GTRD no Bone Marrow (K562) 21367031
chr1 202062909 202063602 ZNF274 GTRD no Cervix (HeLa-S3) 21367032
chr1 202062927 202063592 ZNF143 GTRD no Epithelial (MCF-7) 21367033
chr1 202062935 202063620 ZNF143 GTRD no Epithelial (MCF-7) 21367034
chr1 202062954 202063544 ZNF274 GTRD no Liver (HepG2) 21367035
chr1 202062956 202063564 ZNF274 GTRD no Bone Marrow (K562) 21367036
chr1 202062959 202063515 ZNF274 GTRD no Liver (HepG2) 21367037
chr1 202062959 202063596 ZNF274 GTRD no Liver (HepG2) 21367038
chr1 202062960 202063605 ZNF274 GTRD no Liver (HepG2) 21367039
chr1 202062961 202063781 ZNF143 GTRD no Epithelial (MCF-7) 21367040
chr1 202062967 202063613 ZNF274 GTRD no Bone Marrow (K562) 21367041
chr1 202062969 202063608 ZNF274 GTRD no Cervix (HeLa-S3) 21367042
chr1 202062973 202063540 ZNF274 GTRD no Liver (HepG2) 21367043
chr1 202062977 202063525 ZNF274 GTRD no Bone Marrow (K562) 21367044
chr1 202062979 202063612 ZNF143 GTRD no Epithelial (MCF-7) 21367045
chr1 202062985 202063568 ZNF143 GTRD no Epithelial (MCF-7) 21367046
chr1 202062993 202063481 ZNF274 GTRD no Bone Marrow (K562) 21367047
chr1 202062995 202063476 ZNF274 GTRD no Liver (HepG2) 21367048
chr1 202063005 202063571 ZNF274 GTRD no Liver (HepG2) 21367049
chr1 202063006 202063636 ZNF274 GTRD no Liver (HepG2) 21367050
chr1 202063008 202063602 ZNF274 GTRD no Cervix (HeLa-S3) 21367051
chr1 202063009 202063566 ZNF274 GTRD no Cervix (HeLa-S3) 21367052
chr1 202063012 202063559 ZNF274 GTRD no Cervix (HeLa-S3) 21367053
chr1 202063015 202063524 ZNF274 GTRD no Liver (HepG2) 21367054
chr1 202063026 202063488 ZNF274 GTRD no Liver (HepG2) 21367055
chr1 202063031 202063630 ZNF143 GTRD no Epithelial (MCF-7) 21367056
chr1 202063049 202063543 ZNF274 GTRD no Bone Marrow (K562) 21367057
chr1 202063049 202063579 ZNF143 GTRD no Epithelial (MCF-7) 21367058
chr1 202063053 202063420 ZNF274 GTRD no Liver (HepG2) 21367059
chr1 202063054 202063590 TCF7L2 GTRD no Colon (HCT116) 21367060
chr1 202063056 202063585 ZNF143 GTRD no Epithelial (MCF-7) 21367061
chr1 202063059 202063528 ZNF143 GTRD no Epithelial (MCF-7) 21367062
chr1 202063060 202063577 ZNF274 GTRD no Liver (HepG2) 21367063
chr1 202063063 202063361 ZNF274 GTRD no Liver (HepG2) 21367064
chr1 202063066 202063478 ZNF274 GTRD no Bone Marrow (K562) 21367065
chr1 202063068 202063476 ZNF274 GTRD no Bone Marrow (K562) 21367066
chr1 202063068 202063539 ZNF143 GTRD no Epithelial (MCF-7) 21367067
chr1 202063069 202063577 ZNF143 GTRD no Epithelial (MCF-7) 21367068
chr1 202063081 202063582 ZNF274 GTRD no Liver (HepG2) 21367069
chr1 202063089 202063436 ZNF274 GTRD no Bone Marrow (K562) 21367070
chr1 202063095 202063454 ZNF274 GTRD no Liver (HepG2) 21367071
chr1 202063096 202063508 ZNF274 GTRD no Liver (HepG2) 21367072
chr1 202063097 202063495 ZNF274 GTRD no Liver (HepG2) 21367073
chr1 202063098 202063574 ZNF274 GTRD no Liver (HepG2) 21367074
chr1 202063101 202063498 ZNF274 GTRD no Bone Marrow (K562) 21367075
chr1 202063103 202063546 ZNF143 GTRD no Epithelial (MCF-7) 21367076
chr1 202063112 202063514 ZNF274 GTRD no Liver (HepG2) 21367077
chr1 202063127 202063500 ZNF274 GTRD no Liver (HepG2) 21367078
chr1 202063128 202063433 ZNF274 GTRD no Bone Marrow (K562) 21367079
chr1 202063133 202063475 ZNF274 GTRD no Liver (HepG2) 21367080
chr1 202063137 202063508 ZNF143 GTRD no Epithelial (MCF-7) 21367081
chr1 202063139 202063465 ZNF274 GTRD no Liver (HepG2) 21367082
chr1 202063160 202063563 ZNF143 GTRD no Epithelial (MCF-7) 21367083
chr1 202063164 202063563 ZNF143 GTRD no Epithelial (MCF-7) 21367084
chr1 202063168 202063564 ZNF274 GTRD no Liver (HepG2) 21367085
chr1 202063196 202063714 ZNF143 GTRD no Epithelial (MCF-7) 21367086
chr1 202063200 202063567 ZNF274 GTRD no Liver (HepG2) 21367087
chr1 202063218 202063458 SOX2 GTRD no Neural Stem Cells (H9) 21367088
chr1 202063219 202063237 NFYA JASPAR yes 34552995
chr1 202063222 202063238 NFYA JASPAR yes 34552996
Genes associated with rs12096563[chr1:202063222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More