EnhancerDB
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  3. rs12097513[chr1:185529227]
Enhancers that have rs12097513[chr1:185529227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185522965 185545824 enh816
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Stomach
chr1 185528945 185529618 vista4271
VISTA
Transcript factors that have rs12097513[chr1:185529227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185527979 185529438 ZNF274 GTRD no Bone Marrow (K562) 107852446
chr1 185528989 185529381 CTCF UCSC Txn Factor no Conserved 107852448
chr1 185528997 185529357 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852449
chr1 185529002 185529598 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852450
chr1 185529005 185529375 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852451
chr1 185529024 185529312 RAD21 UCSC Txn Factor no Conserved 107852452
chr1 185529029 185529299 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852453
chr1 185529033 185529323 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107852454
chr1 185529036 185529306 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107852455
chr1 185529042 185529332 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107852456
chr1 185529043 185529273 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107852457
chr1 185529049 185529309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852458
chr1 185529050 185529280 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107852459
chr1 185529054 185529324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852460
chr1 185529054 185529428 ZNF143 GTRD no Epithelial (MCF-7) 107852461
chr1 185529059 185529289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852462
chr1 185529060 185529304 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852463
chr1 185529061 185529311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852464
chr1 185529064 185529280 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107852465
chr1 185529089 185529609 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852466
chr1 185529090 185529420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852467
chr1 185529095 185529265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852468
chr1 185529098 185529245 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107852469
chr1 185529100 185529410 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852470
chr1 185529101 185529241 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107852471
chr1 185529108 185529253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107852473
chr1 185529119 185529383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852474
chr1 185529129 185529231 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852475
chr1 185529130 185529228 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852476
chr1 185529135 185529455 RUNX3 UCSC Txn Factor no Conserved 107852477
chr1 185529135 185529455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852478
chr1 185529139 185529383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852479
chr1 185529153 185529367 SPI1 UCSC Txn Factor no Conserved 107852480
chr1 185529163 185529367 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852481
chr1 185529164 185529328 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852482
chr1 185529185 185529465 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852483
chr1 185529193 185529429 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852484
chr1 185529209 185529499 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852485
chr1 185529216 185529229 ATF4 JASPAR yes 33822234
chr1 185529216 185529229 ATF4 JASPAR yes 118417696
Genes associated with rs12097513[chr1:185529227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More